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In this section you can find only the main top-level features scheduled for next releases. For a more detailed list you can go to GitHub Issues at https://github.com/opencb/opencga/issues


OpenCGA v2.x Planned Releases


OpenCGA v1.x Planned Releases

1.4.0 (January 2018)

General


Catalog

  • Complete deletes and propagation, with this we aim to complete REST API

Storage

  • Support Translocations as a Structural Variant

1.3.0 (November 2017)

General

  • CLI autocomplete implemented
  • New and fully functional R client library for REST web services, with this the four client libraries are fully implemented

Catalog

  • New Family data model finished, now it is production ready, with this Sample, Individual and Family models are completed and integrated
  • New Versioning feature implemented for Sample, Individual and Family. Now we can track any change in those data models, users can query o review any version of those documents
  • New Export functionality implemented
  • New Study administrative group called admins, all users in this group will be granted some special permissions at Study level such as create groups or share data, this will make Study administration much easier
  • New ClinicalAnalysis data model added, this allows to define and stored different clinical interpretation analysis, this is still experimental and it should not be used in production
  • Performance improvements when checking permissions (ACL) in create and update methods

Storage

  • Improved support for Structural Variants, in this release we will fully support Insertion, Deletion and Copy Number variants
  • New VariantMetadata implemented, this is exported together with the variant data to be further analysed with other OpenCB projects using Spark
  • Some HBase physical schema improvements
  • Support Amazon EMR HAdoop cluster
  • Performance improvements when querying variants from samples, this will have a big impact in clinical interpretation analysis


Unscheduled features

The following features have been accepted but no release version has been assigned:

  • Add test for the CLI
  • Support Slurm

You can find detailed information for some of them at https://github.com/opencb/opencga/milestone/10

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