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We will here focus on those end points of the API which are of more interest for HGVA users, giving examples of their use and pin pointing certain peculiarities of the parameters for HGVA. ProjectsData is hierarchically organised in Projects and Studies. Please, have a look at Data: sources and HGVA organization in order to fully understand the behaviour of the web services.

Getting information about projects

Getting all metadata from a particular project:

http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/projects/{projects}/info

For example, getting all metadata for the reference_grch37 project:

http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/projects/reference_grch37/info?sid=wHO5F2FMmm5xFs0cg89Q

Getting all metadata from all studies associated to a particular project:

http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/projects/{projects}/studies

For example, getting all studies and their metadata for the cancer_grch37 project:

http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/projects/referencecancer_grch37/studies?sid=wHO5F2FMmm5xFs0cg89Q

Studies
http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/studies/search
http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/studies/reference_grch37%3A1kG_phase3/summary
http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/studies/reference_grch37%3A1kG_phase3/info?sid=wHO5F2FMmm5xFs0cg89Q
http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/studies/reference_grch37%3A1kG_phase3/samples?sid=wHO5F2FMmm5xFs0cg89Q
http://bioinfodev.hpc.cam.ac.uk/hgva-1.0/webservices/rest/v1/studies/reference_grch37%3A1kG_phase3/variants?sid=wHO5F2FMmm5xFs0cg89Q&histogram=false&interval=2000&merge=false&limit=3

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