var consequenceTypes = {
// This is the impact color. It allows to customise both the impact categories and desired colors
color: {
high: "red",
moderate: "orange",
low: "blue",
modifier: "green"
},
/* 'Title' is optional. if there is no title provided then 'name' is going to be used.
There are two more optional properties - 'checked' and 'color'. They can be set to display them default in web application.
Similarly 'description' is optional as well.
*/
categories: [
{
id: "",
name: "",
title: "Intergenic",
description: "",
terms: [
{
id: "SO:0001631",
name: "upstream_gene_variant",
title: "upstream gene variant",
description: "A sequence variant located 5' of a gene",
impact: "modifier"
},
.
.
.
]
},
.
.
]
};