The title, version and logo of web application are taken from config.js.
For every menu item in the navigation bar, there is visibility option. It accepts three values - public, private and none.
var application = { title: "IVA", version: "v0.6.0", logo: "images/opencb-logo.png", menu: [ { id: "samples", title: "Samples", visibility: "public" }, { id: "browser", title: "Variant Browser", visibility: "public", // Allows to provide default filters for the browser filters: [ { name: "Example BRCA2", query: { gene: "BRCA2", conservation: "phylop<0.001" } } ] }, { id: "prioritization", title: "Prioritization", visibility: "public", submenu: [ { id: "family-prioritization", title: "Family", visibility: "public" }, { id: "cancer-prioritization", title: "Cancer", visibility: "public" }, { separator: true, visibility: "public" }, { id: "prioritizationCC", title: "Case-Control", visibility: "public" } ] }, { id: "beacon", title: "Beacon", visibility: "public" }, { id: "tools", title: "Tools", visibility: "public", submenu: [ { id: "ibs", title: "IBS", visibility: "public" }, { id: "burden", title: "Burden Test", visibility: "public" }, { separator: true, visibility: "public" }, { id: "exporter", title: "Exporter", visibility: "public" }, { id: "saturation", title: "Saturation", visibility: "public" } ] }, { id: "genomeBrowser", title: "Genome Browser", visibility: "public", } ], search: { placeholder: "Search", visibility: "public" }, settings: { visibility: "public" }, about: [ {name: "Documentation", url: "http://docs.opencb.org/display/iva/IVA+Home", icon: "fa fa-book"}, {name: "Tutorial", url: "http://docs.opencb.org/display/iva/Tutorials", icon: ""}, {name: "Source code", url: "https://github.com/opencb/iva", icon: "fa fa-github"}, {name: "Contact", url: "http://docs.opencb.org/display/iva/About", icon: "fa fa-envelope"}, {name: "FAQ", url: "", icon: ""} ], login: { visibility: "public" }, breadcrumb: { title: "Projects", visibility: "public" } }; |
Table of Contents: