This page describes how to setup an instance of CellBase, and populate
You do not need to install CellBase to run queries. See Using CellBase for information how to run queries. |
Which sort of hardware you need depends on how much data you need, query load, etc. A full CellBase instance is 1 TB of data, but loading only genomic data is XXX GB. Also loading and querying data is very resource intensive, we recommend at least XXX GB of RAM.
Below are the software dependencies required by CellBase.
Software | Version | Purpose |
---|---|---|
Java | 8 | |
MongoDB | 3.6 | Database |
Tomcat | 8.5x | |
Docker | 18 | Building Ensembl |
Now that you have your own installation of CellBase, see Using CellBase for information how to run queries.
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