logLevel: "INFO" logFile: null openRegister: false userDefaultQuota: 200000 databasePrefix: ${OPENCGA.DB.PREFIX} dataDir: ${OPENCGA.USER.WORKSPACE} tempJobsDir: ${OPENCGA.JOBS.DIR} toolDir: ${OPENCGA.TOOLS.DIR} admin: password: "" email: "" audit: maxDocuments: 20000000 # Maximum number of documents that will be created in the audit collection. maxSize: 100000000000 # Maximum size that the audit collection will have in bytes. javaClass: "" # Java class of the audit implementation to be used to audit. exclude: [] # Array of resource:action to select pairwise resource-actions to be excluded for audit purposes. monitor: daysToRemove: 30 executionDaemonInterval: 4000 # number of milliseconds between checks fileDaemonInterval: 8000 # number of milliseconds between checks port: ${OPENCGA.MONITOR.PORT} execution: mode: ${OPENCGA.EXECUTION.MODE} defaultQueue: "" availableQueues: "" toolsPerQueue: {} email: host: ${OPENCGA.MAIL.HOST} port: ${OPENCGA.MAIL.PORT} user: ${OPENCGA.MAIL.USER} password: ${OPENCGA.MAIL.PASSWORD} from: "" ssl: false catalog: # offset: Starting point for the catalog internal ids. Use a big offset number (1000000 for instance) if you plan to use numerical ids # for names or aliases of any entity. offset: 0 database: hosts: - ${OPENCGA.CATALOG.DB.HOSTS} user: ${OPENCGA.CATALOG.DB.USER} password: ${OPENCGA.CATALOG.DB.PASSWORD} options: authenticationDatabase: ${OPENCGA.CATALOG.DB.AUTHENTICATION_DATABASE} connectionsPerHost: ${OPENCGA.CATALOG.DB.CONNECTIONS_PER_HOST} authentication: # Session expiration time in seconds expiration: 3600 # LDAP configuration example #authenticationOrigins: #- id: ldap # Any id # type: LDAP # At the moment, we only support LDAP # host: ldap://localhost:9000 # options: # usersSearch: dc=ge,dc=co,dc=uk # Base search to look for the users # groupsSearch: ou=general,ou=groups,dc=ge,dc=co,dc=uk # Base search to look for the groups server: rest: port: ${OPENCGA.SERVER.REST.PORT} logFile: null defaultLimit: 2000 maxLimit: 5000 grpc: port: ${OPENCGA.SERVER.GRPC.PORT} logFile: null |
Table of Contents: