Data
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organisation
OpenCGA uses a hierarchical structure to organize datasets. Briefly, Projects, Studies and Cohorts are used to organize HGVA metadata:
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Please, click on http://bioinfo.hpc.cam.ac.uk/hgva-1.0/... to get a full list of currently available datasets (studies) in HGVA and how they are organized in different projects.
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Datasets
Data source | Version/Date |
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1000 genomes project GRCh37 | Phase 3 2016-05 |
1000 genomes project GRCh38 | Phase 3 2016-10 |
Exome Sequencing Project | 2016-05 |
Exome Aggregation Consortium | 0.3.1 2016-05 |
Genome of the Netherlands | Release 5 2016-05 |
UK10K project | 2016-05 |
Spanish Medical Genome Project | 2016-12 |
QIMR Berghofer Melanoma | 2016-12 |
Chronic Myeloid Leukemia - Russian Academy of Medical Sciences | 2016-12 |
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