HGVA
Page tree

Versions Compared

Old Version 23

changes.mady.by.user Nacho Medina

Saved on

compared with

New Version 24

changes.mady.by.user Nacho Medina

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.


Tip
iconfalse
titleWelcome to HGVA space!

Welcome to the Human Genomic Variation Archive project. Here you will find plenty of information regarding what HGVA project is and how to use it. You can visit it at

http://bioinfodev.hpc.cam.ac.uk/web-apps/iva-v0.6/src/

Main Features

  • Most important high-quality variant studies normalized and integrated in just one server database
  • Rich variant annotation performed
  • Population frequencies calculated
  • Interactive web-based data mining tool based on IVA

Contact

  • Javier Lopez
  • Ignacio Medina


Latest news:

Blog Posts
max103
spaceshgva
sortcreation
reversetrue
contenttitles
labelsexcerptsnews


Current Studies

Assembly GRCh37

  • 1000 Genomes Phase3
  • ExAC
  • ESP6500
  • ...

Assembly GRCh38

...

Statistics

200M unique variants

1B variants


Chart
3Dtrue
imageFormatpng
dataOrientationvertical
titleVariant Studies GCh37


StudyNum. variants
1000G80000000
ExAC

63000000

ESP650010000000



Developers

Source Code

Web based on IVA project at  https://github.com/opencb/iva/tree/app/hgva

Server based on OpenCGA at  https://github.com/opencb/opencga

Contributing

HGVA is a collaborative project that aims to integrate as many reference human studies as possible, you can contact us for feature request. If you want to contribute to the code you are more than welcome to contribute to IVA and OpenCGA


Recent space activity

Recently Updated
typespage, comment, blogpost
max5
hideHeadingtrue
themesocial