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Demo and Test Environments

There are two different environments for testing and learning how to use OpenCGA, they are called opencga-demo and and opencga-test, see details in this table:


Environments
opencga-demoopencga-test (coming soon)
Nameopencga-demoopencga-test
OpenCGA Version

Latest stable release.

GitHub: master branch

Latest development release.

GitHub: develop branch

IVA Webhttp://bioinfo.hpc.cam.ac.uk/web-apps/opencga-demohttp://bioinfo.hpc.cam.ac.uk/web-apps/opencga-test
REST APIhttp://bioinfo.hpc.cam.ac.uk/opencga-demo/webservices

http://bioinfodev.hpc.cam.ac.uk/opencga-test/webservices/

(notice the domain bioinfodev)

User/Password

demo/demo

Project and Studies IDs

Project: exomes_grch37

(

, studies:

  • corpasome
and
  • ceph_trio
)

Clinical Analysis

Study ceph_trio:

  • CA-1: Family analysis

Description

This installation is ideal to:

  • learn and try stable functionality
  • develop scripts


As you can see both environments aim to contain the same datasets organised in the same Project and Study structure with the same IDs and names, this will make much easier to test scripts and functionality to the new development version. All tutorials are expected to use opencga-demo environment whenever is possible.

Available Tutorials

In this section you will find several tutorials:

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Table of Contents:

Table of Contents