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fileId

String

File ID.

sampleId

String

Sample ID.

gene

String

Gene name.

stats

List<TranscriptCoverageStats>


transcriptId

String

Transcript ID.

length

int

The transcript length as the sum of the lengths  of its exons.

depthsList<Float>

Double[10]

% coverage for 1x, 5x, 10x, 15x, 20x, 25x, 30x, 40x, 50x, 60x

lowCoverageThreshold

int

Regions under this coverage depth threshold will be reported in the list lowCoverageRegions. Default value: 30.

lowCoverageRegions

List<LowCoverageRegion>

Regions whose coverage depth is under the value lowCoverageThreshold.

start

int

Region start position.

end

int

Region end position

depthAvg

double

Average depth.

depthMin

int

Minimum depth.



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