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The goal of a clinical analysis is to identify, from millions of patient's variants, a few ones that may explain the disease. Once selected a few variants, they are classified according to a pathogenicity or clinical significance criteria.

For each selected variant, OpenCGA creates a reported variant that mainly, consists of a list of reported events or evidences. An each reported event classifies the variant according to it tier, ACGM value, clinical significance, drug response, trait association and functional effect.

DrugResponse drugResponse;private TraitAssociation traitAssociation;private FunctionalEffect functionalEffect;private Tumorigenesis tumorigenesis;

Rare Disease

Cancer




Note

This is only available in the Enterprise Edition


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