id String | Transcript ID. |
name String | Transcript name. |
biotype String | Transcript biotype. |
chromosome String | Chromosome where the transcript is located. |
start int | Position where the transcript starts. |
end int | Position where the transcript ends. |
length int | The transcript length as the sum of the lengths of its exons. |
depths Double[10] | % coverage for 1x, 5x, 10x, 15x, 20x, 25x, 30x, 40x, 50x, 60x, 75x and 100x |
lowCoverageThreshold int | Regions under this coverage depth threshold will be reported in the list lowCoverageRegions. Default value: 30. |
lowCoverageRegionStats List<LowCoverageRegionStats> | Statistics for regions whose coverage depth is under the value lowCoverageThreshold. chromosome String | Chromosome. | start int | Region start position. | end int | Region end position | depthAvg double | Average depth. | depthMin int | Minimum depth. |
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exonStats List<ExonCoverageStats> | Statistics for each exon in the transcript. id String | Exon ID. | chromosome String | Chromosome. | start int | Region start position. | end int | Region end position | depthAvg double | Average depth. | depthMin int | Minimum depth. | depthMax int | Maximum depth. |
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